Dataset examples

We have divided our dataset examples into Analyzer and Viewer.

Giotto Analyzer

Check out one of these following tutorials
Example 1. seqFISH+ SS cortex
Example 2. Visium brain
Example 3. Visium kidney
Example 4. slideSeq cell type enrichment
Example 5. slideSeq clustering, spatial domain
Example 6. cyCIF PDAC tumors
Example 7. CODEX spleen
Example 8. STARmap V1 cortex
Example 9. merFISH hypothalamus
Example 10. osmFISH SS cortex

Giotto Viewer

Some examples to follow along:
Example 1. no image simple seqFISH+ viewer
Example 2. with image 10X Visium viewer
Example 3. with image, cell segmentation seqFISH+ viewer

These are interactive web demo pages and some usage videos we recorded of Viewer.
Example 4. web demo mouse cortex (seqFISH+)
Example 5. web demo mouse olfactory bulb (seqFISH+)
Example 6. recorded video demo 10X Visium
Example 7. recorded video demo Transcript visualization